Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 AC015909.5-201ENST00000624336 2266 ntBASIC17.03■□□□□ 0.32
CHGBP05060 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.03■□□□□ 0.32
CHGBP05060 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHGBP05060 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.02■□□□□ 0.32
CHGBP05060 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.02■□□□□ 0.32
CHGBP05060 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.02■□□□□ 0.32
CHGBP05060 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.02■□□□□ 0.32
CHGBP05060 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHGBP05060 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CHGBP05060 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHGBP05060 AL512430.1-201ENST00000392575 860 ntBASIC17.02■□□□□ 0.32
CHGBP05060 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHGBP05060 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.02■□□□□ 0.32
CHGBP05060 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.02■□□□□ 0.32
CHGBP05060 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.02■□□□□ 0.32
CHGBP05060 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.02■□□□□ 0.32
CHGBP05060 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.02■□□□□ 0.32
CHGBP05060 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.02■□□□□ 0.32
CHGBP05060 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.02■□□□□ 0.32
CHGBP05060 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHGBP05060 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.02■□□□□ 0.32
CHGBP05060 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.02■□□□□ 0.32
CHGBP05060 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.02■□□□□ 0.32
CHGBP05060 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHGBP05060 YRDCP1-201ENST00000621419 643 ntBASIC17.02■□□□□ 0.32
CHGBP05060 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.02■□□□□ 0.32
CHGBP05060 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CHGBP05060 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHGBP05060 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHGBP05060 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHGBP05060 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHGBP05060 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.02■□□□□ 0.31
CHGBP05060 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHGBP05060 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHGBP05060 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHGBP05060 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.02■□□□□ 0.31
CHGBP05060 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHGBP05060 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.01■□□□□ 0.31
CHGBP05060 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHGBP05060 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHGBP05060 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.01■□□□□ 0.31
CHGBP05060 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.01■□□□□ 0.31
CHGBP05060 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.01■□□□□ 0.31
CHGBP05060 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.01■□□□□ 0.31
CHGBP05060 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.01■□□□□ 0.31
CHGBP05060 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.01■□□□□ 0.31
CHGBP05060 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.01■□□□□ 0.31
CHGBP05060 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHGBP05060 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.01■□□□□ 0.31
CHGBP05060 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC17.01■□□□□ 0.31
CHGBP05060 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.01■□□□□ 0.31
CHGBP05060 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHGBP05060 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 RPL13AP3-202ENST00000494676 1473 ntBASIC17■□□□□ 0.31
CHGBP05060 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CHGBP05060 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17■□□□□ 0.31
CHGBP05060 AC069218.1-201ENST00000435269 762 ntBASIC17■□□□□ 0.31
CHGBP05060 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHGBP05060 RPL18AP8-201ENST00000486071 528 ntBASIC17■□□□□ 0.31
CHGBP05060 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17■□□□□ 0.31
CHGBP05060 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CHGBP05060 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17■□□□□ 0.31
CHGBP05060 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17■□□□□ 0.31
CHGBP05060 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17■□□□□ 0.31
CHGBP05060 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms