Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC007952.5-201ENST00000572818 1486 ntBASIC13.04□□□□□ -0.32
P04436 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.04□□□□□ -0.32
P04436 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
P04436 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.03□□□□□ -0.32
P04436 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.03□□□□□ -0.32
P04436 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
P04436 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
P04436 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.03□□□□□ -0.32
P04436 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.03□□□□□ -0.32
P04436 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.03□□□□□ -0.32
P04436 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.03□□□□□ -0.32
P04436 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
P04436 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.03□□□□□ -0.32
P04436 AP000356.3-201ENST00000382243 753 ntBASIC13.03□□□□□ -0.32
P04436 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 AC026316.1-201ENST00000398900 414 ntBASIC13.03□□□□□ -0.32
P04436 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.03□□□□□ -0.32
P04436 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 TMEM198B-204ENST00000484016 896 ntBASIC13.03□□□□□ -0.32
P04436 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.03□□□□□ -0.32
P04436 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.03□□□□□ -0.32
P04436 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.03□□□□□ -0.32
P04436 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.03□□□□□ -0.32
P04436 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P04436 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.03□□□□□ -0.32
P04436 TEKT4P2-202ENST00000559466 1312 ntBASIC13.03□□□□□ -0.32
P04436 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
P04436 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.03□□□□□ -0.32
P04436 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P04436 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
P04436 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
P04436 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04436 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04436 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04436 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04436 AC012617.1-204ENST00000586340 2305 ntBASIC13.02□□□□□ -0.32
P04436 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04436 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P04436 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
P04436 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.02□□□□□ -0.32
P04436 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.02□□□□□ -0.32
P04436 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
P04436 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04436 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04436 BX640514.1-201ENST00000583223 1918 ntBASIC13.02□□□□□ -0.32
P04436 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.02□□□□□ -0.32
P04436 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04436 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04436 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04436 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04436 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
P04436 AC103592.1-201ENST00000394513 664 ntBASIC13.02□□□□□ -0.33
P04436 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
P04436 HMGA1P1-201ENST00000415560 1062 ntBASIC13.02□□□□□ -0.33
P04436 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.02□□□□□ -0.33
P04436 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.02□□□□□ -0.33
P04436 NOC2LP1-201ENST00000450578 752 ntBASIC13.02□□□□□ -0.33
P04436 FTH1P22-201ENST00000456305 520 ntBASIC13.02□□□□□ -0.33
P04436 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
P04436 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.02□□□□□ -0.33
P04436 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.02□□□□□ -0.33
P04436 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.02□□□□□ -0.33
P04436 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
P04436 AC128714.1-201ENST00000637035 887 ntBASIC13.02□□□□□ -0.33
P04436 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.02□□□□□ -0.33
P04436 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
P04436 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
P04436 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
P04436 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.02□□□□□ -0.33
P04436 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.02□□□□□ -0.33
P04436 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.02□□□□□ -0.33
P04436 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.02□□□□□ -0.33
P04436 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04436 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04436 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04436 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
P04436 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
P04436 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.02□□□□□ -0.33
P04436 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
P04436 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.02□□□□□ -0.33
P04436 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms