Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC8.48□□□□□ -1.05
APOBP04114 GOLGA2P10-201ENST00000550961 817 ntBASIC8.48□□□□□ -1.05
APOBP04114 RAB42P1-201ENST00000555078 316 ntBASIC8.48□□□□□ -1.05
APOBP04114 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC8.48□□□□□ -1.05
APOBP04114 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC8.48□□□□□ -1.05
APOBP04114 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC8.48□□□□□ -1.05
APOBP04114 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 PXK-210ENST00000479241 2817 ntTSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 MKRN7P-201ENST00000433469 1371 ntBASIC8.48□□□□□ -1.05
APOBP04114 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 RPS6-201ENST00000315377 863 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 FAM213AP2-201ENST00000521579 683 ntBASIC8.47□□□□□ -1.05
APOBP04114 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC8.47□□□□□ -1.05
APOBP04114 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 PSME3-213ENST00000592169 826 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 AC026271.1-201ENST00000447794 1348 ntBASIC8.47□□□□□ -1.05
APOBP04114 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 USP8-219ENST00000625664 1568 ntTSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 AK2-208ENST00000487289 920 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 HNRNPA1P7-201ENST00000521273 963 ntBASIC8.47□□□□□ -1.05
APOBP04114 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 CYP4F10P-201ENST00000589560 752 ntBASIC8.47□□□□□ -1.05
APOBP04114 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
APOBP04114 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 FTLP3-201ENST00000427242 528 ntBASIC8.47□□□□□ -1.05
APOBP04114 PARVG-208ENST00000466375 820 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 AC090825.2-201ENST00000557959 739 ntBASIC8.47□□□□□ -1.05
APOBP04114 METTL23-211ENST00000589977 617 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
APOBP04114 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC8.47□□□□□ -1.05
APOBP04114 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 RN7SL638P-201ENST00000494527 290 ntBASIC8.47□□□□□ -1.05
APOBP04114 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC8.47□□□□□ -1.05
APOBP04114 MIR6074-201ENST00000612054 107 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms