Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.74□□□□□ -0.37
APOC1P02654 AC104506.1-201ENST00000609247 429 ntBASIC12.74□□□□□ -0.37
APOC1P02654 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
APOC1P02654 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.74□□□□□ -0.37
APOC1P02654 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 TRIM80P-201ENST00000455685 2848 ntBASIC12.74□□□□□ -0.37
APOC1P02654 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
APOC1P02654 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC1P02654 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
APOC1P02654 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 AHCYP2-201ENST00000430630 1300 ntBASIC12.73□□□□□ -0.37
APOC1P02654 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC1P02654 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.73□□□□□ -0.37
APOC1P02654 CICP12-201ENST00000455801 843 ntBASIC12.73□□□□□ -0.37
APOC1P02654 AL590640.2-201ENST00000457038 527 ntBASIC12.73□□□□□ -0.37
APOC1P02654 TMEM198B-204ENST00000484016 896 ntBASIC12.73□□□□□ -0.37
APOC1P02654 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.73□□□□□ -0.37
APOC1P02654 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.73□□□□□ -0.37
APOC1P02654 AC078819.1-201ENST00000547454 765 ntBASIC12.73□□□□□ -0.37
APOC1P02654 AC012085.1-201ENST00000548270 765 ntBASIC12.73□□□□□ -0.37
APOC1P02654 AL596325.1-201ENST00000563991 1082 ntBASIC12.73□□□□□ -0.37
APOC1P02654 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.73□□□□□ -0.37
APOC1P02654 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC1P02654 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC1P02654 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 RHOXF1P1-202ENST00000635473 501 ntBASIC12.73□□□□□ -0.37
APOC1P02654 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC1P02654 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC1P02654 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC1P02654 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC1P02654 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.72□□□□□ -0.37
APOC1P02654 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC1P02654 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOC1P02654 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOC1P02654 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC1P02654 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC1P02654 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms