Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.78□□□□□ -0.36
APOA1P02647 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.78□□□□□ -0.36
APOA1P02647 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.78□□□□□ -0.36
APOA1P02647 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APOA1P02647 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.78□□□□□ -0.36
APOA1P02647 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOA1P02647 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APOA1P02647 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
APOA1P02647 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOA1P02647 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.77□□□□□ -0.36
APOA1P02647 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
APOA1P02647 AL359845.1-201ENST00000458202 1648 ntBASIC12.77□□□□□ -0.36
APOA1P02647 AC015688.4-201ENST00000580780 1647 ntBASIC12.77□□□□□ -0.36
APOA1P02647 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOA1P02647 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
APOA1P02647 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOA1P02647 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOA1P02647 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
APOA1P02647 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOA1P02647 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.77□□□□□ -0.36
APOA1P02647 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOA1P02647 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.77□□□□□ -0.37
APOA1P02647 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.77□□□□□ -0.37
APOA1P02647 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.77□□□□□ -0.37
APOA1P02647 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.77□□□□□ -0.37
APOA1P02647 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.77□□□□□ -0.37
APOA1P02647 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.77□□□□□ -0.37
APOA1P02647 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.77□□□□□ -0.37
APOA1P02647 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.77□□□□□ -0.37
APOA1P02647 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.77□□□□□ -0.37
APOA1P02647 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.77□□□□□ -0.37
APOA1P02647 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.77□□□□□ -0.37
APOA1P02647 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.77□□□□□ -0.37
APOA1P02647 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.77□□□□□ -0.37
APOA1P02647 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.77□□□□□ -0.37
APOA1P02647 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.77□□□□□ -0.37
APOA1P02647 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.77□□□□□ -0.37
APOA1P02647 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.77□□□□□ -0.37
APOA1P02647 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 TUBB3P1-201ENST00000405796 1332 ntBASIC12.77□□□□□ -0.37
APOA1P02647 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
APOA1P02647 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
APOA1P02647 CSPG4P12-201ENST00000558282 4853 ntBASIC12.77□□□□□ -0.37
APOA1P02647 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.77□□□□□ -0.37
APOA1P02647 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.77□□□□□ -0.37
APOA1P02647 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.77□□□□□ -0.37
APOA1P02647 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 AOC4P-203ENST00000566825 2289 ntBASIC12.77□□□□□ -0.37
APOA1P02647 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
APOA1P02647 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
APOA1P02647 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOA1P02647 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOA1P02647 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.76□□□□□ -0.37
APOA1P02647 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 SALL4P5-201ENST00000419001 1760 ntBASIC12.76□□□□□ -0.37
APOA1P02647 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.76□□□□□ -0.37
APOA1P02647 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.76□□□□□ -0.37
APOA1P02647 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOA1P02647 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOA1P02647 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOA1P02647 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms