Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 HSPB1P2-201ENST00000448722 546 ntBASIC11.51□□□□□ -0.57
SRRM4A7MD48 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 SCARNA21-201ENST00000517026 139 ntBASIC11.51□□□□□ -0.57
SRRM4A7MD48 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 AP005482.1-201ENST00000563722 1273 ntBASIC11.51□□□□□ -0.57
SRRM4A7MD48 AC005730.2-201ENST00000564549 1184 ntBASIC11.51□□□□□ -0.57
SRRM4A7MD48 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PPT1-213ENST00000641319 2388 ntBASIC11.51□□□□□ -0.57
SRRM4A7MD48 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 AC063926.2-201ENST00000623766 1308 ntBASIC11.51□□□□□ -0.57
SRRM4A7MD48 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 AC092580.1-201ENST00000433998 658 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 OR2R1P-201ENST00000441404 914 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 RPL18P13-201ENST00000478088 569 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 RPSAP36-202ENST00000494591 1261 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 AC005324.6-201ENST00000587972 613 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 AC133552.6-201ENST00000613406 534 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 AC009542.2-202ENST00000619004 1067 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 COX11-210ENST00000639671 696 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 AC020658.7-201ENST00000624274 2442 ntBASIC11.5□□□□□ -0.57
SRRM4A7MD48 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SRRM4A7MD48 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.5□□□□□ -0.57
SRRM4A7MD48 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms