Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 AC011498.7-201ENST00000624986 2027 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 BEND3P3-201ENST00000611030 2440 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 PID1-202ENST00000392054 2745 ntTSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 OR8S1-201ENST00000310194 1080 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 MIR658-201ENST00000385210 100 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 AC239800.4-201ENST00000603712 296 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 AC083964.2-201ENST00000623988 2396 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 MIR193BHG-211ENST00000641433 5365 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 E2F3P2-201ENST00000447755 1422 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 AC064801.2-201ENST00000625052 1303 ntBASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
HLA-DRB4X5D2U9 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
HLA-DRB4X5D2U9 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 AC020910.6-201ENST00000623084 1459 ntBASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 C2-206ENST00000442278 2434 ntTSL 2 BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HLA-DRB4X5D2U9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms