Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 AC242376.1-201ENST00000559033 726 ntBASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 AC084346.2-201ENST00000607097 949 ntBASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 AC015909.3-201ENST00000572855 1794 ntBASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 AC012044.1-201ENST00000603431 297 ntBASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL4A3BPQ9Y5P4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL4A3BPQ9Y5P4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL4A3BPQ9Y5P4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.96■□□□□ 0.14
COL4A3BPQ9Y5P4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
COL4A3BPQ9Y5P4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.96■□□□□ 0.14
COL4A3BPQ9Y5P4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.96■□□□□ 0.14
COL4A3BPQ9Y5P4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 CCT8L1P-201ENST00000465400 1674 ntBASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 RNA5SP359-201ENST00000364838 113 ntBASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 ELK2AP-201ENST00000392510 1007 ntBASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 MIR3907-201ENST00000579424 151 ntBASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 AL133499.1-201ENST00000596207 608 ntBASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 AC015967.2-201ENST00000624092 234 ntBASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 AC006435.4-201ENST00000625037 234 ntBASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 AL356737.1-201ENST00000634391 234 ntBASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms