Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 LINC02486-201ENST00000604157 3000 ntBASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
POLR1DQ9Y2S0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 AL035633.1-201ENST00000406139 838 ntBASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 CNN2P10-201ENST00000443067 918 ntBASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 HIST2H2BB-201ENST00000449108 381 ntBASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 COX20P2-201ENST00000452636 358 ntBASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 CTBP2P5-201ENST00000454986 1264 ntBASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
POLR1DQ9Y2S0 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
POLR1DQ9Y2S0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
POLR1DQ9Y2S0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 USP17L6P-201ENST00000382470 1197 ntBASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 AL161932.2-201ENST00000435436 679 ntBASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 RAB43P1-201ENST00000561790 589 ntBASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms