Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIP2Q9UDT6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIP2Q9UDT6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIP2Q9UDT6 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 ELK2AP-201ENST00000392510 1007 ntBASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 EEF1DP6-201ENST00000449232 372 ntBASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 AC234782.1-201ENST00000451950 919 ntBASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 IGLV3-15-201ENST00000518356 244 ntBASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 SORD2P-201ENST00000558556 1069 ntBASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 AC026803.1-201ENST00000569130 274 ntBASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 AC006453.1-201ENST00000636037 1257 ntBASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 CICP20-201ENST00000443330 2801 ntBASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIP2Q9UDT6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 OR2K2-202ENST00000374428 1038 ntBASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 CEP164P1-201ENST00000455142 418 ntBASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 AC008723.1-201ENST00000506922 207 ntBASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLIP2Q9UDT6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 TBC1D3J-201ENST00000620719 1426 ntBASIC16.96■□□□□ 0.3
CLIP2Q9UDT6 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 RNA5SP359-201ENST00000364838 113 ntBASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLIP2Q9UDT6 AC026320.2-201ENST00000434379 478 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 225.2 ms