Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 AP005019.2-201ENST00000615104 511 ntBASIC12.7□□□□□ -0.38
DUX4Q9UBX2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUX4Q9UBX2 AC073869.1-201ENST00000415574 2762 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 AP001267.2-201ENST00000532619 2086 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 CSPG4P12-201ENST00000558282 4853 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 KRT8P35-201ENST00000483942 1338 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 BAATP1-201ENST00000412284 1225 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 CROCCP4-201ENST00000457096 498 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 TPT1P11-201ENST00000458482 498 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 SLC25A47P1-201ENST00000531577 414 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 PTP4A1P2-201ENST00000546033 454 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 AC009486.1-201ENST00000569860 813 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 PRSS30P-206ENST00000641773 873 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 KRT8P14-201ENST00000414254 1442 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 LILRP1-201ENST00000444199 1370 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.69□□□□□ -0.38
DUX4Q9UBX2 AC018665.1-201ENST00000622927 1362 ntBASIC12.69□□□□□ -0.38
DUX4Q9UBX2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms