Protein–RNA interactions for Protein: Q9P2B4

CTTNBP2NL, CTTNBP2 N-terminal-like protein, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NLQ9P2B4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 LAP3P2-201ENST00000454686 1454 ntBASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 AC244394.1-201ENST00000435000 1665 ntBASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 COL6A4P2-202ENST00000504443 2753 ntBASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 NCLP1-201ENST00000445357 1963 ntBASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.24■□□□□ 0.03
CTTNBP2NLQ9P2B4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 PDIA3P1-201ENST00000471856 1510 ntBASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 AC027612.1-201ENST00000445234 2395 ntBASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 RPL7P3-201ENST00000441388 714 ntBASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 ST13P19-201ENST00000442505 1124 ntBASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 KRT17P7-201ENST00000451704 1104 ntBASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.23■□□□□ 0.03
CTTNBP2NLQ9P2B4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.22■□□□□ 0.03
CTTNBP2NLQ9P2B4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms