Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 USP17L6P-201ENST00000382470 1197 ntBASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 AL627422.1-201ENST00000434104 580 ntBASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 AC092171.5-201ENST00000608012 942 ntBASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 MIR6842-201ENST00000612539 65 ntBASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 AC084781.1-201ENST00000613737 656 ntBASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.3■□□□□ 0.36
HMG20BQ9P0W2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 AC078991.1-201ENST00000437297 610 ntBASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 RN7SL181P-201ENST00000462921 277 ntBASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 AC005740.1-201ENST00000515639 522 ntBASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 NDUFB10P1-201ENST00000567319 521 ntBASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 AL021707.6-201ENST00000609212 491 ntBASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms