Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 LAP3P2-201ENST00000454686 1454 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC01815-202ENST00000641468 1409 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AHCYP4-201ENST00000419201 1315 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RN7SKP109-201ENST00000410592 316 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AL627389.1-201ENST00000413508 1182 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 DNAJB1P1-201ENST00000429417 1024 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC253536.4-201ENST00000440539 267 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 KRT18P66-201ENST00000452970 1269 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms