Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 MIR645-201ENST00000385283 94 ntBASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 CTBP2P4-201ENST00000513884 920 ntBASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 IGHV3-37-201ENST00000518544 340 ntBASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 CICP8-201ENST00000455800 2813 ntBASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 AC113367.3-201ENST00000508316 1912 ntBASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHKBP1Q8TBC3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 DGCR9-201ENST00000609630 2415 ntBASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AL355334.1-201ENST00000417713 215 ntBASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AL161932.2-201ENST00000435436 679 ntBASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AC018463.1-201ENST00000456674 917 ntBASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 RPL18AP8-201ENST00000486071 528 ntBASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHKBP1Q8TBC3 AC215219.1-201ENST00000400706 1817 ntBASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AC099521.3-201ENST00000624251 2938 ntBASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms