Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC21.85■■□□□ 1.09
VPS8Q8N3P4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC21.85■■□□□ 1.09
VPS8Q8N3P4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VPS8Q8N3P4 AL118522.1-201ENST00000611368 560 ntBASIC21.85■■□□□ 1.09
VPS8Q8N3P4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VPS8Q8N3P4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
VPS8Q8N3P4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VPS8Q8N3P4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VPS8Q8N3P4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 AL513477.1-201ENST00000602865 2407 ntBASIC21.84■■□□□ 1.09
VPS8Q8N3P4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 FAM90A12P-201ENST00000519497 2375 ntBASIC21.84■■□□□ 1.09
VPS8Q8N3P4 FAM90A24P-201ENST00000520792 2369 ntBASIC21.84■■□□□ 1.09
VPS8Q8N3P4 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 AC253536.4-201ENST00000440539 267 ntBASIC21.84■■□□□ 1.09
VPS8Q8N3P4 RN7SL23P-201ENST00000484055 275 ntBASIC21.84■■□□□ 1.09
VPS8Q8N3P4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 AP001065.2-201ENST00000617205 644 ntBASIC21.84■■□□□ 1.09
VPS8Q8N3P4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 NCLP1-201ENST00000445357 1963 ntBASIC21.84■■□□□ 1.09
VPS8Q8N3P4 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC21.84■■□□□ 1.09
VPS8Q8N3P4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VPS8Q8N3P4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 MIR1307-201ENST00000408840 149 ntBASIC21.83■■□□□ 1.09
VPS8Q8N3P4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 AC226150.1-201ENST00000544259 466 ntBASIC21.83■■□□□ 1.09
VPS8Q8N3P4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC21.83■■□□□ 1.09
VPS8Q8N3P4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
VPS8Q8N3P4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
VPS8Q8N3P4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC21.83■■□□□ 1.08
VPS8Q8N3P4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
VPS8Q8N3P4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
VPS8Q8N3P4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VPS8Q8N3P4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
VPS8Q8N3P4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VPS8Q8N3P4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 AL359881.3-201ENST00000602640 1721 ntBASIC21.82■■□□□ 1.08
VPS8Q8N3P4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 CD44-224ENST00000526669 870 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 JPT2-214ENST00000569765 782 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 AC132812.1-201ENST00000583145 892 ntBASIC21.82■■□□□ 1.08
VPS8Q8N3P4 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 MIR7845-201ENST00000618396 99 ntBASIC21.82■■□□□ 1.08
VPS8Q8N3P4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS8Q8N3P4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AC040160.2-201ENST00000623816 1675 ntBASIC21.81■■□□□ 1.08
VPS8Q8N3P4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms