Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 CTBP2P5-201ENST00000454986 1264 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 RBM8B-201ENST00000555532 525 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 RAB43P1-201ENST00000561790 589 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 C2orf69P2-201ENST00000562032 1123 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 DUX4L46-201ENST00000566845 751 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AC106886.1-201ENST00000568660 600 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AC104506.1-201ENST00000609247 429 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AC012645.4-201ENST00000610691 1061 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 CICP16-201ENST00000502609 2813 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 AC011481.3-201ENST00000623895 5594 ntBASIC9.52□□□□□ -0.89
SYCNQ0VAF6 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCNQ0VAF6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AL139385.1-201ENST00000611744 3272 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 NDUFAB1P1-201ENST00000404262 460 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC079178.1-201ENST00000420915 656 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 FAM58BP-201ENST00000439056 645 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 HIST2H2BB-201ENST00000449108 381 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 CROCCP4-201ENST00000457096 498 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 KRT17P8-201ENST00000540749 863 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC132192.2-201ENST00000596206 1147 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC009884.2-201ENST00000603110 324 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC021016.3-201ENST00000608367 477 ntBASIC9.51□□□□□ -0.89
SYCNQ0VAF6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SYCNQ0VAF6 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms