Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 LINC00115-201ENST00000473798 1317 ntBASIC12.72□□□□□ -0.37
EFNB1P98172 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB1P98172 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.72□□□□□ -0.37
EFNB1P98172 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 AC016694.1-201ENST00000434179 700 ntBASIC12.72□□□□□ -0.37
EFNB1P98172 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.72□□□□□ -0.37
EFNB1P98172 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB1P98172 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB1P98172 FTH1P14-201ENST00000482930 551 ntBASIC12.72□□□□□ -0.37
EFNB1P98172 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.72□□□□□ -0.37
EFNB1P98172 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 USP32P1-208ENST00000506594 1164 ntBASIC12.72□□□□□ -0.37
EFNB1P98172 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.72□□□□□ -0.37
EFNB1P98172 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.72□□□□□ -0.37
EFNB1P98172 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.72□□□□□ -0.37
EFNB1P98172 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 PPY2P-201ENST00000582808 702 ntBASIC12.72□□□□□ -0.37
EFNB1P98172 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.72□□□□□ -0.37
EFNB1P98172 AC244669.2-201ENST00000612320 853 ntBASIC12.72□□□□□ -0.37
EFNB1P98172 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB1P98172 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
EFNB1P98172 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB1P98172 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB1P98172 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB1P98172 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.71□□□□□ -0.37
EFNB1P98172 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.71□□□□□ -0.37
EFNB1P98172 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB1P98172 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.71□□□□□ -0.37
EFNB1P98172 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB1P98172 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.71□□□□□ -0.37
EFNB1P98172 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
EFNB1P98172 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 AC144522.1-201ENST00000625111 1658 ntBASIC12.71□□□□□ -0.37
EFNB1P98172 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.71□□□□□ -0.37
EFNB1P98172 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB1P98172 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
EFNB1P98172 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.71□□□□□ -0.37
EFNB1P98172 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB1P98172 AC092580.1-201ENST00000433998 658 ntBASIC12.71□□□□□ -0.37
EFNB1P98172 AC002472.2-201ENST00000442739 958 ntBASIC12.71□□□□□ -0.37
EFNB1P98172 HIST2H2BB-201ENST00000449108 381 ntBASIC12.71□□□□□ -0.37
EFNB1P98172 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.71□□□□□ -0.37
EFNB1P98172 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.71□□□□□ -0.37
EFNB1P98172 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB1P98172 PGAM1P5-201ENST00000548011 764 ntBASIC12.71□□□□□ -0.37
EFNB1P98172 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.71□□□□□ -0.37
EFNB1P98172 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB1P98172 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
EFNB1P98172 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB1P98172 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB1P98172 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB1P98172 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms