Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 AL133338.1-201ENST00000565695 1517 ntBASIC13.6□□□□□ -0.23
SKP1P63208 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.6□□□□□ -0.23
SKP1P63208 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.6□□□□□ -0.23
SKP1P63208 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SKP1P63208 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SKP1P63208 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.6□□□□□ -0.23
SKP1P63208 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SKP1P63208 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.6□□□□□ -0.23
SKP1P63208 AC092580.1-201ENST00000433998 658 ntBASIC13.6□□□□□ -0.23
SKP1P63208 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 AL133466.1-201ENST00000447582 150 ntBASIC13.6□□□□□ -0.23
SKP1P63208 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 KRT18P15-201ENST00000458108 1291 ntBASIC13.6□□□□□ -0.23
SKP1P63208 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.6□□□□□ -0.23
SKP1P63208 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
SKP1P63208 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.6□□□□□ -0.23
SKP1P63208 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.6□□□□□ -0.23
SKP1P63208 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.6□□□□□ -0.23
SKP1P63208 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.6□□□□□ -0.23
SKP1P63208 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.6□□□□□ -0.23
SKP1P63208 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.6□□□□□ -0.23
SKP1P63208 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.6□□□□□ -0.23
SKP1P63208 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SKP1P63208 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.6□□□□□ -0.23
SKP1P63208 CICP4-201ENST00000447359 2812 ntBASIC13.6□□□□□ -0.23
SKP1P63208 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SKP1P63208 PCDHA5-203ENST00000614258 4248 ntBASIC13.6□□□□□ -0.23
SKP1P63208 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SKP1P63208 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.6□□□□□ -0.23
SKP1P63208 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SKP1P63208 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SKP1P63208 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SKP1P63208 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.59□□□□□ -0.23
SKP1P63208 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 AC103592.1-201ENST00000394513 664 ntBASIC13.59□□□□□ -0.23
SKP1P63208 AL596276.2-201ENST00000447525 331 ntBASIC13.59□□□□□ -0.23
SKP1P63208 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.59□□□□□ -0.23
SKP1P63208 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 RN7SL774P-201ENST00000577467 290 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms