Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
UBA52P62987 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
UBA52P62987 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 MIR326-201ENST00000362220 95 ntBASIC12.46□□□□□ -0.41
UBA52P62987 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.46□□□□□ -0.41
UBA52P62987 CNN2P8-201ENST00000421872 913 ntBASIC12.46□□□□□ -0.41
UBA52P62987 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.46□□□□□ -0.41
UBA52P62987 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.46□□□□□ -0.41
UBA52P62987 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 AP001582.1-201ENST00000525856 295 ntBASIC12.46□□□□□ -0.41
UBA52P62987 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
UBA52P62987 C2orf69P2-201ENST00000562032 1123 ntBASIC12.46□□□□□ -0.41
UBA52P62987 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.46□□□□□ -0.41
UBA52P62987 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 AC107373.2-201ENST00000607735 490 ntBASIC12.46□□□□□ -0.41
UBA52P62987 AL022328.3-201ENST00000607943 679 ntBASIC12.46□□□□□ -0.41
UBA52P62987 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.46□□□□□ -0.41
UBA52P62987 AL354702.1-201ENST00000442006 1960 ntBASIC12.46□□□□□ -0.41
UBA52P62987 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.46□□□□□ -0.41
UBA52P62987 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBA52P62987 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBA52P62987 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.46□□□□□ -0.42
UBA52P62987 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.46□□□□□ -0.42
UBA52P62987 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.46□□□□□ -0.42
UBA52P62987 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.46□□□□□ -0.42
UBA52P62987 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
UBA52P62987 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.46□□□□□ -0.42
UBA52P62987 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.46□□□□□ -0.42
UBA52P62987 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBA52P62987 FP325330.2-201ENST00000624219 5630 ntBASIC12.46□□□□□ -0.42
UBA52P62987 DRD5P1-201ENST00000456605 1438 ntBASIC12.45□□□□□ -0.42
UBA52P62987 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 AL607033.1-201ENST00000623900 1599 ntBASIC12.45□□□□□ -0.42
UBA52P62987 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.45□□□□□ -0.42
UBA52P62987 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBA52P62987 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.45□□□□□ -0.42
UBA52P62987 Z93015.1-201ENST00000451718 390 ntBASIC12.45□□□□□ -0.42
UBA52P62987 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.45□□□□□ -0.42
UBA52P62987 KRT18P25-201ENST00000508931 1278 ntBASIC12.45□□□□□ -0.42
UBA52P62987 ZNF767P-206ENST00000513792 565 ntBASIC12.45□□□□□ -0.42
UBA52P62987 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms