Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S1P61966 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
AP1S1P61966 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.33□□□□□ -0.11
AP1S1P61966 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
AP1S1P61966 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.33□□□□□ -0.11
AP1S1P61966 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP1S1P61966 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.33□□□□□ -0.11
AP1S1P61966 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.33□□□□□ -0.11
AP1S1P61966 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP1S1P61966 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP1S1P61966 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
AP1S1P61966 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 MARK2P16-201ENST00000605714 1723 ntBASIC14.33□□□□□ -0.12
AP1S1P61966 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 AL157996.1-201ENST00000624684 2299 ntBASIC14.33□□□□□ -0.12
AP1S1P61966 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 FGFR3P5-201ENST00000564496 886 ntBASIC14.33□□□□□ -0.12
AP1S1P61966 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.33□□□□□ -0.12
AP1S1P61966 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
AP1S1P61966 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.33□□□□□ -0.12
AP1S1P61966 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
AP1S1P61966 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 AL139158.3-201ENST00000641212 1562 ntBASIC14.33□□□□□ -0.12
AP1S1P61966 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
AP1S1P61966 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.33□□□□□ -0.12
AP1S1P61966 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
AP1S1P61966 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.33□□□□□ -0.12
AP1S1P61966 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP1S1P61966 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 GRK6P1-201ENST00000400595 1711 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S1P61966 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S1P61966 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 SNX18-202ENST00000343017 3140 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S1P61966 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
AP1S1P61966 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 MIR557-201ENST00000385239 98 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 AL583805.1-201ENST00000391389 531 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.32□□□□□ -0.12
AP1S1P61966 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP1S1P61966 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.32□□□□□ -0.12
AP1S1P61966 AP000358.1-201ENST00000456260 156 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.32□□□□□ -0.12
AP1S1P61966 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.32□□□□□ -0.12
AP1S1P61966 AC005740.1-201ENST00000515639 522 ntBASIC14.32□□□□□ -0.12
AP1S1P61966 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S1P61966 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.32□□□□□ -0.12
AP1S1P61966 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.32□□□□□ -0.12
AP1S1P61966 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.32□□□□□ -0.12
AP1S1P61966 NDUFB10P1-201ENST00000567319 521 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms