Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SEC61A1P61619 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
SEC61A1P61619 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SEC61A1P61619 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SEC61A1P61619 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 MIR1202-201ENST00000408529 83 ntBASIC12.63□□□□□ -0.39
SEC61A1P61619 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.63□□□□□ -0.39
SEC61A1P61619 FAM21FP-201ENST00000426241 1131 ntBASIC12.63□□□□□ -0.39
SEC61A1P61619 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.63□□□□□ -0.39
SEC61A1P61619 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.63□□□□□ -0.39
SEC61A1P61619 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.63□□□□□ -0.39
SEC61A1P61619 RNA5SP486-201ENST00000515961 83 ntBASIC12.63□□□□□ -0.39
SEC61A1P61619 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.63□□□□□ -0.39
SEC61A1P61619 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SEC61A1P61619 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 AC131902.2-201ENST00000566892 2172 ntBASIC12.63□□□□□ -0.39
SEC61A1P61619 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 AL354702.1-201ENST00000442006 1960 ntBASIC12.62□□□□□ -0.39
SEC61A1P61619 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SEC61A1P61619 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.62□□□□□ -0.39
SEC61A1P61619 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 AC006001.1-201ENST00000325130 474 ntBASIC12.62□□□□□ -0.39
SEC61A1P61619 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms