Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SUMO3P55854 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SUMO3P55854 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 ELK2AP-201ENST00000392510 1007 ntBASIC12.89□□□□□ -0.35
SUMO3P55854 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.89□□□□□ -0.35
SUMO3P55854 ACTG1P2-201ENST00000415776 1125 ntBASIC12.89□□□□□ -0.35
SUMO3P55854 OR8T1P-201ENST00000421347 918 ntBASIC12.89□□□□□ -0.35
SUMO3P55854 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.89□□□□□ -0.35
SUMO3P55854 ACTG1P11-201ENST00000425411 1125 ntBASIC12.89□□□□□ -0.35
SUMO3P55854 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.89□□□□□ -0.35
SUMO3P55854 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.89□□□□□ -0.35
SUMO3P55854 RN7SL258P-201ENST00000478664 300 ntBASIC12.89□□□□□ -0.35
SUMO3P55854 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
SUMO3P55854 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.89□□□□□ -0.35
SUMO3P55854 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SUMO3P55854 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.89□□□□□ -0.35
SUMO3P55854 MIR6769A-201ENST00000617340 73 ntBASIC12.89□□□□□ -0.35
SUMO3P55854 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SUMO3P55854 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.89□□□□□ -0.35
SUMO3P55854 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SUMO3P55854 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SUMO3P55854 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.89□□□□□ -0.35
SUMO3P55854 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
SUMO3P55854 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.88□□□□□ -0.35
SUMO3P55854 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.88□□□□□ -0.35
SUMO3P55854 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.88□□□□□ -0.35
SUMO3P55854 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.88□□□□□ -0.35
SUMO3P55854 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.88□□□□□ -0.35
SUMO3P55854 Z97180.1-201ENST00000445173 988 ntBASIC12.88□□□□□ -0.35
SUMO3P55854 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.88□□□□□ -0.35
SUMO3P55854 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.88□□□□□ -0.35
SUMO3P55854 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 AC024681.1-201ENST00000521917 487 ntBASIC12.88□□□□□ -0.35
SUMO3P55854 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 PHBP15-201ENST00000574228 665 ntBASIC12.88□□□□□ -0.35
SUMO3P55854 MEG3_2.1-201ENST00000611456 105 ntBASIC12.88□□□□□ -0.35
SUMO3P55854 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.88□□□□□ -0.35
SUMO3P55854 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.88□□□□□ -0.35
SUMO3P55854 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 AC015909.3-201ENST00000572855 1794 ntBASIC12.88□□□□□ -0.35
SUMO3P55854 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 AC023794.5-201ENST00000564380 2157 ntBASIC12.88□□□□□ -0.35
SUMO3P55854 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SUMO3P55854 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.88□□□□□ -0.35
SUMO3P55854 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SUMO3P55854 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
SUMO3P55854 AC068760.1-201ENST00000493579 1953 ntBASIC12.87□□□□□ -0.35
SUMO3P55854 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.87□□□□□ -0.35
SUMO3P55854 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SUMO3P55854 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms