Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.52□□□□□ -0.24
KNTC1P50748 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.52□□□□□ -0.24
KNTC1P50748 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
KNTC1P50748 AC010632.2-201ENST00000588369 1224 ntBASIC13.52□□□□□ -0.24
KNTC1P50748 AC005274.1-201ENST00000623460 802 ntBASIC13.52□□□□□ -0.24
KNTC1P50748 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
KNTC1P50748 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KNTC1P50748 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KNTC1P50748 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
KNTC1P50748 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KNTC1P50748 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
KNTC1P50748 AC018442.1-201ENST00000421439 2061 ntBASIC13.52□□□□□ -0.24
KNTC1P50748 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.52□□□□□ -0.25
KNTC1P50748 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
KNTC1P50748 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
KNTC1P50748 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.52□□□□□ -0.25
KNTC1P50748 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.52□□□□□ -0.25
KNTC1P50748 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.52□□□□□ -0.25
KNTC1P50748 BRI3P1-201ENST00000440440 378 ntBASIC13.52□□□□□ -0.25
KNTC1P50748 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.52□□□□□ -0.25
KNTC1P50748 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.52□□□□□ -0.25
KNTC1P50748 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 BCRP4-201ENST00000506079 804 ntBASIC13.52□□□□□ -0.25
KNTC1P50748 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.52□□□□□ -0.25
KNTC1P50748 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.52□□□□□ -0.25
KNTC1P50748 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC13.52□□□□□ -0.25
KNTC1P50748 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
KNTC1P50748 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.52□□□□□ -0.25
KNTC1P50748 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.52□□□□□ -0.25
KNTC1P50748 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.52□□□□□ -0.25
KNTC1P50748 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 FKBP4P8-201ENST00000610931 1369 ntBASIC13.52□□□□□ -0.25
KNTC1P50748 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
KNTC1P50748 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KNTC1P50748 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KNTC1P50748 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KNTC1P50748 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KNTC1P50748 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC13.52□□□□□ -0.25
KNTC1P50748 PDXDC2P-206ENST00000534700 1315 ntBASIC13.52□□□□□ -0.25
KNTC1P50748 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 NHP2P1-201ENST00000335274 462 ntBASIC13.51□□□□□ -0.25
KNTC1P50748 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
KNTC1P50748 OR10N1P-201ENST00000392758 869 ntBASIC13.51□□□□□ -0.25
KNTC1P50748 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 KRT18P4-201ENST00000422599 1288 ntBASIC13.51□□□□□ -0.25
KNTC1P50748 PSAT1P2-201ENST00000426107 972 ntBASIC13.51□□□□□ -0.25
KNTC1P50748 KRT18P46-201ENST00000435568 1279 ntBASIC13.51□□□□□ -0.25
KNTC1P50748 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
KNTC1P50748 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.51□□□□□ -0.25
KNTC1P50748 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.51□□□□□ -0.25
KNTC1P50748 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
KNTC1P50748 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 AC026691.1-201ENST00000602502 2017 ntBASIC13.51□□□□□ -0.25
KNTC1P50748 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.51□□□□□ -0.25
KNTC1P50748 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.51□□□□□ -0.25
KNTC1P50748 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
KNTC1P50748 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KNTC1P50748 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.51□□□□□ -0.25
KNTC1P50748 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.51□□□□□ -0.25
KNTC1P50748 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.51□□□□□ -0.25
KNTC1P50748 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms