Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
CENPAP49450 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.09□□□□□ -0.31
CENPAP49450 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CENPAP49450 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CENPAP49450 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CENPAP49450 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CENPAP49450 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CENPAP49450 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CENPAP49450 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.08□□□□□ -0.31
CENPAP49450 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CENPAP49450 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.08□□□□□ -0.32
CENPAP49450 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.08□□□□□ -0.32
CENPAP49450 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CENPAP49450 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 MBLAC2-202ENST00000514906 1936 ntBASIC13.08□□□□□ -0.32
CENPAP49450 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.08□□□□□ -0.32
CENPAP49450 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CENPAP49450 AC098614.1-201ENST00000368528 745 ntBASIC13.08□□□□□ -0.32
CENPAP49450 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
CENPAP49450 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.08□□□□□ -0.32
CENPAP49450 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.08□□□□□ -0.32
CENPAP49450 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.08□□□□□ -0.32
CENPAP49450 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.08□□□□□ -0.32
CENPAP49450 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 AL590640.2-201ENST00000457038 527 ntBASIC13.08□□□□□ -0.32
CENPAP49450 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CENPAP49450 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.08□□□□□ -0.32
CENPAP49450 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.08□□□□□ -0.32
CENPAP49450 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.08□□□□□ -0.32
CENPAP49450 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 OR10B1P-201ENST00000601666 907 ntBASIC13.08□□□□□ -0.32
CENPAP49450 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CENPAP49450 AC132938.4-201ENST00000623835 848 ntBASIC13.08□□□□□ -0.32
CENPAP49450 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.08□□□□□ -0.32
CENPAP49450 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.08□□□□□ -0.32
CENPAP49450 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.08□□□□□ -0.32
CENPAP49450 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC13.08□□□□□ -0.32
CENPAP49450 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CENPAP49450 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CENPAP49450 AL138709.1-201ENST00000614840 1693 ntBASIC13.08□□□□□ -0.32
CENPAP49450 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.08□□□□□ -0.32
CENPAP49450 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.08□□□□□ -0.32
CENPAP49450 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CENPAP49450 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.08□□□□□ -0.32
CENPAP49450 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
CENPAP49450 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CENPAP49450 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 AC009093.10-201ENST00000641956 1442 ntBASIC13.07□□□□□ -0.32
CENPAP49450 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.07□□□□□ -0.32
CENPAP49450 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CENPAP49450 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
CENPAP49450 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 FAM8A4P-201ENST00000435433 1213 ntBASIC13.07□□□□□ -0.32
CENPAP49450 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 AL035414.1-201ENST00000451327 857 ntBASIC13.07□□□□□ -0.32
CENPAP49450 AC007389.4-201ENST00000454674 793 ntBASIC13.07□□□□□ -0.32
CENPAP49450 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.07□□□□□ -0.32
CENPAP49450 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms