Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TM4SF4P48230 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC15.79■□□□□ 0.12
TM4SF4P48230 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TM4SF4P48230 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.78■□□□□ 0.12
TM4SF4P48230 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 OR7E12P-201ENST00000344740 973 ntBASIC15.78■□□□□ 0.12
TM4SF4P48230 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TM4SF4P48230 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 U3.41-201ENST00000408711 219 ntBASIC15.78■□□□□ 0.12
TM4SF4P48230 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC15.78■□□□□ 0.12
TM4SF4P48230 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC15.78■□□□□ 0.12
TM4SF4P48230 YBX1P3-201ENST00000468366 909 ntBASIC15.78■□□□□ 0.12
TM4SF4P48230 RN7SL363P-201ENST00000482412 273 ntBASIC15.78■□□□□ 0.12
TM4SF4P48230 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 KRT18P42-201ENST00000505048 1255 ntBASIC15.78■□□□□ 0.12
TM4SF4P48230 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC15.78■□□□□ 0.12
TM4SF4P48230 AC103724.2-201ENST00000520355 476 ntBASIC15.78■□□□□ 0.12
TM4SF4P48230 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC15.78■□□□□ 0.12
TM4SF4P48230 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 AL139424.3-202ENST00000641619 917 ntBASIC15.78■□□□□ 0.12
TM4SF4P48230 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TM4SF4P48230 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.78■□□□□ 0.12
TM4SF4P48230 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TM4SF4P48230 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 NRADDP-202ENST00000641269 1585 ntBASIC15.78■□□□□ 0.12
TM4SF4P48230 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TM4SF4P48230 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.78■□□□□ 0.12
TM4SF4P48230 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.78■□□□□ 0.12
TM4SF4P48230 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TM4SF4P48230 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TM4SF4P48230 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.77■□□□□ 0.12
TM4SF4P48230 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
TM4SF4P48230 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.77■□□□□ 0.12
TM4SF4P48230 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TM4SF4P48230 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.77■□□□□ 0.12
TM4SF4P48230 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC15.77■□□□□ 0.12
TM4SF4P48230 WDR54-202ENST00000409791 854 ntTSL 3 BASIC15.77■□□□□ 0.12
TM4SF4P48230 NOS2P3-201ENST00000411468 867 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC15.77■□□□□ 0.12
TM4SF4P48230 TUBB8P9-201ENST00000422534 1276 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 NOS2P2-201ENST00000426269 867 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC15.77■□□□□ 0.12
TM4SF4P48230 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
TM4SF4P48230 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.77■□□□□ 0.12
TM4SF4P48230 TUBB8P10-201ENST00000430210 1279 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 AC105443.1-201ENST00000433754 712 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 AC008021.1-201ENST00000474180 414 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 RN7SL2-201ENST00000490232 300 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC15.77■□□□□ 0.12
TM4SF4P48230 AC099343.1-201ENST00000513481 609 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC15.77■□□□□ 0.12
TM4SF4P48230 RN7SL4P-201ENST00000584058 295 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 RN7SL202P-201ENST00000584410 262 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC15.77■□□□□ 0.12
TM4SF4P48230 AL109954.3-201ENST00000615088 558 ntBASIC15.77■□□□□ 0.12
TM4SF4P48230 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TM4SF4P48230 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.77■□□□□ 0.12
TM4SF4P48230 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TM4SF4P48230 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TM4SF4P48230 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TM4SF4P48230 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TM4SF4P48230 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TM4SF4P48230 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms