Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 MIR3615-201ENST00000581999 87 ntBASIC12.92□□□□□ -0.34
APOBEC1P41238 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 LINC01815-202ENST00000641468 1409 ntBASIC12.92□□□□□ -0.34
APOBEC1P41238 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 DMBT1P1-203ENST00000636837 4628 ntBASIC12.92□□□□□ -0.34
APOBEC1P41238 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 AC138028.6-201ENST00000616106 1482 ntBASIC12.91□□□□□ -0.34
APOBEC1P41238 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.91□□□□□ -0.34
APOBEC1P41238 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 LINC00115-201ENST00000473798 1317 ntBASIC12.91□□□□□ -0.34
APOBEC1P41238 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.91□□□□□ -0.34
APOBEC1P41238 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.91□□□□□ -0.34
APOBEC1P41238 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.91□□□□□ -0.34
APOBEC1P41238 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
APOBEC1P41238 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.91□□□□□ -0.34
APOBEC1P41238 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.91□□□□□ -0.34
APOBEC1P41238 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.91□□□□□ -0.34
APOBEC1P41238 AC016700.1-201ENST00000429424 312 ntBASIC12.91□□□□□ -0.34
APOBEC1P41238 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.91□□□□□ -0.34
APOBEC1P41238 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.91□□□□□ -0.34
APOBEC1P41238 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.91□□□□□ -0.34
APOBEC1P41238 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.91□□□□□ -0.34
APOBEC1P41238 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
APOBEC1P41238 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.91□□□□□ -0.34
APOBEC1P41238 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.91□□□□□ -0.34
APOBEC1P41238 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
APOBEC1P41238 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.91□□□□□ -0.34
APOBEC1P41238 AC093752.3-201ENST00000567343 901 ntBASIC12.91□□□□□ -0.34
APOBEC1P41238 AL645939.5-201ENST00000606834 243 ntBASIC12.91□□□□□ -0.34
APOBEC1P41238 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.91□□□□□ -0.34
APOBEC1P41238 AL157791.1-201ENST00000553667 1699 ntBASIC12.91□□□□□ -0.34
APOBEC1P41238 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.91□□□□□ -0.34
APOBEC1P41238 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOBEC1P41238 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.91□□□□□ -0.34
APOBEC1P41238 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.91□□□□□ -0.34
APOBEC1P41238 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
APOBEC1P41238 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.91□□□□□ -0.34
APOBEC1P41238 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
APOBEC1P41238 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOBEC1P41238 PEG13-201ENST00000631594 5667 ntBASIC12.91□□□□□ -0.34
APOBEC1P41238 C8orf49-201ENST00000525043 1968 ntBASIC12.9□□□□□ -0.34
APOBEC1P41238 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 TUBBP5-203ENST00000508529 1334 ntBASIC12.9□□□□□ -0.34
APOBEC1P41238 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms