Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
MDH1P40925 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.36□□□□□ -0.11
MDH1P40925 AC020917.4-201ENST00000623994 1999 ntBASIC14.36□□□□□ -0.11
MDH1P40925 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MDH1P40925 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MDH1P40925 AC092028.1-202ENST00000641483 3547 ntBASIC14.36□□□□□ -0.11
MDH1P40925 AC092028.1-201ENST00000641781 3540 ntBASIC14.36□□□□□ -0.11
MDH1P40925 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MDH1P40925 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 AL358781.1-202ENST00000321081 1360 ntBASIC14.35□□□□□ -0.11
MDH1P40925 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.35□□□□□ -0.11
MDH1P40925 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC14.35□□□□□ -0.11
MDH1P40925 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.35□□□□□ -0.11
MDH1P40925 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 SNORA50C-201ENST00000408535 133 ntBASIC14.35□□□□□ -0.11
MDH1P40925 HTR5BP-201ENST00000430851 1154 ntBASIC14.35□□□□□ -0.11
MDH1P40925 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MDH1P40925 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.35□□□□□ -0.11
MDH1P40925 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
MDH1P40925 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.35□□□□□ -0.11
MDH1P40925 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
MDH1P40925 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.35□□□□□ -0.11
MDH1P40925 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.35□□□□□ -0.11
MDH1P40925 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.35□□□□□ -0.11
MDH1P40925 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
MDH1P40925 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC14.35□□□□□ -0.11
MDH1P40925 SNORA50.1-201ENST00000628590 135 ntBASIC14.35□□□□□ -0.11
MDH1P40925 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.35□□□□□ -0.11
MDH1P40925 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.35□□□□□ -0.11
MDH1P40925 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MDH1P40925 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.35□□□□□ -0.11
MDH1P40925 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC14.35□□□□□ -0.11
MDH1P40925 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MDH1P40925 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MDH1P40925 AC009093.10-201ENST00000641956 1442 ntBASIC14.34□□□□□ -0.11
MDH1P40925 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
MDH1P40925 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MDH1P40925 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
MDH1P40925 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 AC004461.1-201ENST00000412461 403 ntBASIC14.34□□□□□ -0.11
MDH1P40925 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.34□□□□□ -0.11
MDH1P40925 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.34□□□□□ -0.11
MDH1P40925 SLC25A1P1-201ENST00000528351 927 ntBASIC14.34□□□□□ -0.11
MDH1P40925 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.34□□□□□ -0.11
MDH1P40925 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 AC120114.3-201ENST00000611923 658 ntBASIC14.34□□□□□ -0.11
MDH1P40925 SPDYE12P-201ENST00000618416 771 ntBASIC14.34□□□□□ -0.11
MDH1P40925 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MDH1P40925 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MDH1P40925 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 LRRC59-203ENST00000576448 1531 ntBASIC14.34□□□□□ -0.11
MDH1P40925 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MDH1P40925 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC14.34□□□□□ -0.11
MDH1P40925 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MDH1P40925 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MDH1P40925 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.33□□□□□ -0.11
MDH1P40925 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms