Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
VARSP26640 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 AL136309.1-201ENST00000403917 691 ntBASIC14.2□□□□□ -0.14
VARSP26640 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.2□□□□□ -0.14
VARSP26640 CNN2P10-201ENST00000443067 918 ntBASIC14.2□□□□□ -0.14
VARSP26640 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.2□□□□□ -0.14
VARSP26640 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.2□□□□□ -0.14
VARSP26640 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.2□□□□□ -0.14
VARSP26640 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.2□□□□□ -0.14
VARSP26640 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC14.2□□□□□ -0.14
VARSP26640 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.2□□□□□ -0.14
VARSP26640 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.2□□□□□ -0.14
VARSP26640 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
VARSP26640 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.19□□□□□ -0.14
VARSP26640 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.19□□□□□ -0.14
VARSP26640 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VARSP26640 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VARSP26640 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.19□□□□□ -0.14
VARSP26640 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC14.19□□□□□ -0.14
VARSP26640 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.19□□□□□ -0.14
VARSP26640 CHMP1AP1-201ENST00000445563 662 ntBASIC14.19□□□□□ -0.14
VARSP26640 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC14.19□□□□□ -0.14
VARSP26640 HIST2H2BB-201ENST00000449108 381 ntBASIC14.19□□□□□ -0.14
VARSP26640 AC004898.1-201ENST00000451057 766 ntBASIC14.19□□□□□ -0.14
VARSP26640 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.19□□□□□ -0.14
VARSP26640 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.19□□□□□ -0.14
VARSP26640 FAM86HP-204ENST00000513466 959 ntBASIC14.19□□□□□ -0.14
VARSP26640 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 MIR6074-201ENST00000612054 107 ntBASIC14.19□□□□□ -0.14
VARSP26640 ZACNP1-201ENST00000612259 710 ntBASIC14.19□□□□□ -0.14
VARSP26640 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.19□□□□□ -0.14
VARSP26640 AC009542.2-202ENST00000619004 1067 ntBASIC14.19□□□□□ -0.14
VARSP26640 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VARSP26640 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
VARSP26640 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
VARSP26640 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VARSP26640 AC138028.6-201ENST00000616106 1482 ntBASIC14.18□□□□□ -0.14
VARSP26640 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 AC126335.2-201ENST00000623362 4637 ntBASIC14.18□□□□□ -0.14
VARSP26640 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.18□□□□□ -0.14
VARSP26640 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.18□□□□□ -0.14
VARSP26640 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VARSP26640 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.18□□□□□ -0.14
VARSP26640 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms