Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN3P26045 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.56□□□□□ -0.08
PTPN3P26045 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN3P26045 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN3P26045 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PTPN3P26045 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN3P26045 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN3P26045 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN3P26045 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PTPN3P26045 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN3P26045 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN3P26045 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN3P26045 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN3P26045 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PTPN3P26045 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
PTPN3P26045 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 BRWD1P1-201ENST00000401091 371 ntBASIC14.55□□□□□ -0.08
PTPN3P26045 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN3P26045 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN3P26045 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN3P26045 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN3P26045 AC044849.1-201ENST00000519737 1188 ntBASIC14.55□□□□□ -0.08
PTPN3P26045 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.55□□□□□ -0.08
PTPN3P26045 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.55□□□□□ -0.08
PTPN3P26045 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 AL590824.1-201ENST00000403828 1349 ntBASIC14.55□□□□□ -0.08
PTPN3P26045 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 AC105206.1-202ENST00000314927 2368 ntBASIC14.55□□□□□ -0.08
PTPN3P26045 LINC01815-202ENST00000641468 1409 ntBASIC14.55□□□□□ -0.08
PTPN3P26045 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
PTPN3P26045 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PTPN3P26045 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
PTPN3P26045 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTPN3P26045 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN3P26045 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN3P26045 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN3P26045 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.54□□□□□ -0.08
PTPN3P26045 NKAIN1P1-201ENST00000435754 582 ntBASIC14.54□□□□□ -0.08
PTPN3P26045 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.54□□□□□ -0.08
PTPN3P26045 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.54□□□□□ -0.08
PTPN3P26045 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.54□□□□□ -0.08
PTPN3P26045 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.54□□□□□ -0.08
PTPN3P26045 MARK2P5-201ENST00000507649 634 ntBASIC14.54□□□□□ -0.08
PTPN3P26045 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.54□□□□□ -0.08
PTPN3P26045 KRT18P8-201ENST00000581937 1246 ntBASIC14.54□□□□□ -0.08
PTPN3P26045 MIR3615-201ENST00000581999 87 ntBASIC14.54□□□□□ -0.08
PTPN3P26045 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms