Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
COL8A2P25067 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
COL8A2P25067 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
COL8A2P25067 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
COL8A2P25067 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.08□□□□□ -0.48
COL8A2P25067 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
COL8A2P25067 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 AC069218.1-201ENST00000435269 762 ntBASIC12.08□□□□□ -0.48
COL8A2P25067 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.08□□□□□ -0.48
COL8A2P25067 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.08□□□□□ -0.48
COL8A2P25067 AC114947.1-202ENST00000514136 344 ntBASIC12.08□□□□□ -0.48
COL8A2P25067 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.08□□□□□ -0.48
COL8A2P25067 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.08□□□□□ -0.48
COL8A2P25067 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.08□□□□□ -0.48
COL8A2P25067 AC007326.1-201ENST00000604539 458 ntBASIC12.08□□□□□ -0.48
COL8A2P25067 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 BRD7P5-201ENST00000299197 1822 ntBASIC12.08□□□□□ -0.48
COL8A2P25067 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.08□□□□□ -0.48
COL8A2P25067 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 KRT8P31-201ENST00000504812 1408 ntBASIC12.08□□□□□ -0.48
COL8A2P25067 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COL8A2P25067 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
COL8A2P25067 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.08□□□□□ -0.48
COL8A2P25067 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
COL8A2P25067 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 CCT8L1P-201ENST00000465400 1674 ntBASIC12.07□□□□□ -0.48
COL8A2P25067 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 AP000356.3-201ENST00000382243 753 ntBASIC12.07□□□□□ -0.48
COL8A2P25067 MIR557-201ENST00000385239 98 ntBASIC12.07□□□□□ -0.48
COL8A2P25067 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.07□□□□□ -0.48
COL8A2P25067 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 KRT8P1-201ENST00000557533 1207 ntBASIC12.07□□□□□ -0.48
COL8A2P25067 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.07□□□□□ -0.48
COL8A2P25067 MIR3147-201ENST00000577811 66 ntBASIC12.07□□□□□ -0.48
COL8A2P25067 MIR4722-201ENST00000578292 60 ntBASIC12.07□□□□□ -0.48
COL8A2P25067 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.07□□□□□ -0.48
COL8A2P25067 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 AC104506.1-201ENST00000609247 429 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms