Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.58■□□□□ 0.24
ERCC3P19447 MIR3180-2-201ENST00000581748 88 ntBASIC16.58■□□□□ 0.24
ERCC3P19447 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC3P19447 AC073911.3-201ENST00000624401 631 ntBASIC16.58■□□□□ 0.24
ERCC3P19447 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC3P19447 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ERCC3P19447 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC3P19447 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC3P19447 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC3P19447 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC3P19447 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ERCC3P19447 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC3P19447 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC3P19447 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.58■□□□□ 0.24
ERCC3P19447 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC3P19447 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ERCC3P19447 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC3P19447 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC3P19447 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC3P19447 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ERCC3P19447 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ERCC3P19447 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC3P19447 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC3P19447 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC3P19447 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 PIN4P1-201ENST00000451079 396 ntBASIC16.57■□□□□ 0.24
ERCC3P19447 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.57■□□□□ 0.24
ERCC3P19447 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.57■□□□□ 0.24
ERCC3P19447 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
ERCC3P19447 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ERCC3P19447 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC3P19447 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC3P19447 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ERCC3P19447 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ERCC3P19447 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ERCC3P19447 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ERCC3P19447 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC3P19447 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC3P19447 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.56■□□□□ 0.24
ERCC3P19447 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ERCC3P19447 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC3P19447 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 AC092580.1-201ENST00000433998 658 ntBASIC16.56■□□□□ 0.24
ERCC3P19447 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 AP003398.1-201ENST00000531124 318 ntBASIC16.56■□□□□ 0.24
ERCC3P19447 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC3P19447 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC3P19447 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.56■□□□□ 0.24
ERCC3P19447 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ERCC3P19447 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC3P19447 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
ERCC3P19447 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
ERCC3P19447 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC3P19447 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ERCC3P19447 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERCC3P19447 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERCC3P19447 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC3P19447 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms