Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CD28P10747 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CD28P10747 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC11.21□□□□□ -0.61
CD28P10747 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CD28P10747 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC11.21□□□□□ -0.61
CD28P10747 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC11.21□□□□□ -0.61
CD28P10747 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC11.21□□□□□ -0.61
CD28P10747 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC11.21□□□□□ -0.61
CD28P10747 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CD28P10747 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
CD28P10747 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC11.21□□□□□ -0.61
CD28P10747 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CD28P10747 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.21□□□□□ -0.62
CD28P10747 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.21□□□□□ -0.62
CD28P10747 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
CD28P10747 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.21□□□□□ -0.62
CD28P10747 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.21□□□□□ -0.62
CD28P10747 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.21□□□□□ -0.62
CD28P10747 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.21□□□□□ -0.62
CD28P10747 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.21□□□□□ -0.62
CD28P10747 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
CD28P10747 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.21□□□□□ -0.62
CD28P10747 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
CD28P10747 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CD28P10747 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 AC023908.3-201ENST00000564211 3047 ntBASIC11.2□□□□□ -0.62
CD28P10747 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 FP325330.2-201ENST00000624219 5630 ntBASIC11.2□□□□□ -0.62
CD28P10747 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.2□□□□□ -0.62
CD28P10747 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC11.2□□□□□ -0.62
CD28P10747 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 AC092580.1-201ENST00000433998 658 ntBASIC11.2□□□□□ -0.62
CD28P10747 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 ALG1L13P-202ENST00000519320 584 ntBASIC11.2□□□□□ -0.62
CD28P10747 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CD28P10747 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC11.2□□□□□ -0.62
CD28P10747 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC11.2□□□□□ -0.62
CD28P10747 AC021016.3-201ENST00000608367 477 ntBASIC11.2□□□□□ -0.62
CD28P10747 WT1-AS_6.1-201ENST00000614919 121 ntBASIC11.2□□□□□ -0.62
CD28P10747 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CD28P10747 AP001065.2-201ENST00000617205 644 ntBASIC11.2□□□□□ -0.62
CD28P10747 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CD28P10747 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms