Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.4□□□□□ -0.1
RETP07949 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.4□□□□□ -0.1
RETP07949 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 MIR2392-201ENST00000584881 84 ntBASIC14.4□□□□□ -0.1
RETP07949 AC007250.1-201ENST00000608934 338 ntBASIC14.4□□□□□ -0.1
RETP07949 MIR6746-201ENST00000620971 63 ntBASIC14.4□□□□□ -0.1
RETP07949 AC002044.2-201ENST00000624910 970 ntBASIC14.4□□□□□ -0.1
RETP07949 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RETP07949 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.4□□□□□ -0.1
RETP07949 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.4□□□□□ -0.1
RETP07949 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.4□□□□□ -0.1
RETP07949 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.4□□□□□ -0.1
RETP07949 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.4□□□□□ -0.1
RETP07949 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RETP07949 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RETP07949 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RETP07949 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.39□□□□□ -0.11
RETP07949 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.39□□□□□ -0.11
RETP07949 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RETP07949 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RETP07949 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 AC004554.1-201ENST00000422830 1468 ntBASIC14.39□□□□□ -0.11
RETP07949 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RETP07949 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.39□□□□□ -0.11
RETP07949 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.39□□□□□ -0.11
RETP07949 SERBP1P2-201ENST00000436888 1164 ntBASIC14.39□□□□□ -0.11
RETP07949 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.39□□□□□ -0.11
RETP07949 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.39□□□□□ -0.11
RETP07949 RN7SL23P-201ENST00000484055 275 ntBASIC14.39□□□□□ -0.11
RETP07949 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 PGAM1P12-201ENST00000505622 748 ntBASIC14.39□□□□□ -0.11
RETP07949 GCOM2-201ENST00000509133 1104 ntBASIC14.39□□□□□ -0.11
RETP07949 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.39□□□□□ -0.11
RETP07949 AC007952.4-201ENST00000573866 637 ntBASIC14.39□□□□□ -0.11
RETP07949 RN7SL357P-201ENST00000581065 298 ntBASIC14.39□□□□□ -0.11
RETP07949 AP005264.6-204ENST00000588436 719 ntBASIC14.39□□□□□ -0.11
RETP07949 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.39□□□□□ -0.11
RETP07949 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RETP07949 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RETP07949 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 MIR600HG-201ENST00000449175 5984 ntBASIC14.39□□□□□ -0.11
RETP07949 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.39□□□□□ -0.11
RETP07949 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.39□□□□□ -0.11
RETP07949 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.39□□□□□ -0.11
RETP07949 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.39□□□□□ -0.11
RETP07949 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.39□□□□□ -0.11
RETP07949 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RETP07949 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.39□□□□□ -0.11
RETP07949 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RETP07949 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.38□□□□□ -0.11
RETP07949 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RETP07949 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RETP07949 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.38□□□□□ -0.11
RETP07949 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.38□□□□□ -0.11
RETP07949 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RETP07949 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.38□□□□□ -0.11
RETP07949 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RETP07949 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
RETP07949 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RETP07949 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms