Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHGBP05060 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.05■□□□□ 0.32
CHGBP05060 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.05■□□□□ 0.32
CHGBP05060 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.05■□□□□ 0.32
CHGBP05060 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHGBP05060 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC17.04■□□□□ 0.32
CHGBP05060 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.04■□□□□ 0.32
CHGBP05060 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.04■□□□□ 0.32
CHGBP05060 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CHGBP05060 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHGBP05060 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.04■□□□□ 0.32
CHGBP05060 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CHGBP05060 HMGA1P1-201ENST00000415560 1062 ntBASIC17.04■□□□□ 0.32
CHGBP05060 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.04■□□□□ 0.32
CHGBP05060 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.04■□□□□ 0.32
CHGBP05060 AC114947.1-202ENST00000514136 344 ntBASIC17.04■□□□□ 0.32
CHGBP05060 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.04■□□□□ 0.32
CHGBP05060 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.04■□□□□ 0.32
CHGBP05060 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.04■□□□□ 0.32
CHGBP05060 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.04■□□□□ 0.32
CHGBP05060 NDUFB10P1-201ENST00000567319 521 ntBASIC17.04■□□□□ 0.32
CHGBP05060 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.04■□□□□ 0.32
CHGBP05060 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.04■□□□□ 0.32
CHGBP05060 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHGBP05060 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC17.04■□□□□ 0.32
CHGBP05060 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHGBP05060 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHGBP05060 AC130686.1-201ENST00000622936 2466 ntBASIC17.04■□□□□ 0.32
CHGBP05060 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHGBP05060 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17.03■□□□□ 0.32
CHGBP05060 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.03■□□□□ 0.32
CHGBP05060 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CHGBP05060 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC17.03■□□□□ 0.32
CHGBP05060 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.03■□□□□ 0.32
CHGBP05060 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.03■□□□□ 0.32
CHGBP05060 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHGBP05060 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHGBP05060 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.03■□□□□ 0.32
CHGBP05060 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.03■□□□□ 0.32
CHGBP05060 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.03■□□□□ 0.32
CHGBP05060 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.03■□□□□ 0.32
CHGBP05060 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.03■□□□□ 0.32
CHGBP05060 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.03■□□□□ 0.32
CHGBP05060 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.03■□□□□ 0.32
CHGBP05060 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.03■□□□□ 0.32
CHGBP05060 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.03■□□□□ 0.32
CHGBP05060 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.03■□□□□ 0.32
CHGBP05060 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.03■□□□□ 0.32
CHGBP05060 AL133467.4-201ENST00000602953 725 ntBASIC17.03■□□□□ 0.32
CHGBP05060 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHGBP05060 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHGBP05060 MARK2P16-201ENST00000605714 1723 ntBASIC17.03■□□□□ 0.32
CHGBP05060 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHGBP05060 KRT8P18-201ENST00000413425 1445 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms