Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC15.34■□□□□ 0.05
TUBB4AP04350 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBB4AP04350 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBB4AP04350 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBB4AP04350 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBB4AP04350 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.34■□□□□ 0.05
TUBB4AP04350 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBB4AP04350 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBB4AP04350 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TUBB4AP04350 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TUBB4AP04350 HNRNPMP1-201ENST00000560685 1768 ntBASIC15.34■□□□□ 0.05
TUBB4AP04350 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBB4AP04350 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.34■□□□□ 0.05
TUBB4AP04350 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBB4AP04350 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.33■□□□□ 0.05
TUBB4AP04350 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TUBB4AP04350 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
TUBB4AP04350 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.33■□□□□ 0.05
TUBB4AP04350 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TUBB4AP04350 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC15.33■□□□□ 0.05
TUBB4AP04350 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TUBB4AP04350 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.33■□□□□ 0.05
TUBB4AP04350 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBB4AP04350 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TUBB4AP04350 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TUBB4AP04350 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TUBB4AP04350 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.33■□□□□ 0.04
TUBB4AP04350 LINC00638-201ENST00000555578 2518 ntBASIC15.33■□□□□ 0.04
TUBB4AP04350 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TUBB4AP04350 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TUBB4AP04350 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.33■□□□□ 0.04
TUBB4AP04350 TSEN15P1-201ENST00000423257 515 ntBASIC15.33■□□□□ 0.04
TUBB4AP04350 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.33■□□□□ 0.04
TUBB4AP04350 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBB4AP04350 RN7SL399P-201ENST00000471648 279 ntBASIC15.33■□□□□ 0.04
TUBB4AP04350 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBB4AP04350 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.33■□□□□ 0.04
TUBB4AP04350 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBB4AP04350 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TUBB4AP04350 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBB4AP04350 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TUBB4AP04350 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBB4AP04350 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBB4AP04350 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TUBB4AP04350 PTPRVP-205ENST00000641549 5067 ntBASIC15.32■□□□□ 0.04
TUBB4AP04350 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TUBB4AP04350 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 AOC4P-203ENST00000566825 2289 ntBASIC15.32■□□□□ 0.04
TUBB4AP04350 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBB4AP04350 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBB4AP04350 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBB4AP04350 AC027369.3-201ENST00000530465 3707 ntBASIC15.32■□□□□ 0.04
TUBB4AP04350 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBB4AP04350 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
TUBB4AP04350 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TUBB4AP04350 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 HMGA1P1-201ENST00000415560 1062 ntBASIC15.32■□□□□ 0.04
TUBB4AP04350 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBB4AP04350 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBB4AP04350 AC023141.5-201ENST00000458585 616 ntBASIC15.32■□□□□ 0.04
TUBB4AP04350 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.32■□□□□ 0.04
TUBB4AP04350 BRI3BPP1-201ENST00000594224 787 ntBASIC15.32■□□□□ 0.04
TUBB4AP04350 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBB4AP04350 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TUBB4AP04350 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBB4AP04350 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBB4AP04350 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBB4AP04350 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBB4AP04350 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBB4AP04350 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 632.1 ms