Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VTNP04004 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VTNP04004 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.56■□□□□ 0.08
VTNP04004 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VTNP04004 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.55■□□□□ 0.08
VTNP04004 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VTNP04004 AC020910.6-201ENST00000623084 1459 ntBASIC15.55■□□□□ 0.08
VTNP04004 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.55■□□□□ 0.08
VTNP04004 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 HMGA1P1-201ENST00000415560 1062 ntBASIC15.55■□□□□ 0.08
VTNP04004 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.55■□□□□ 0.08
VTNP04004 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.55■□□□□ 0.08
VTNP04004 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.55■□□□□ 0.08
VTNP04004 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.55■□□□□ 0.08
VTNP04004 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.55■□□□□ 0.08
VTNP04004 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.55■□□□□ 0.08
VTNP04004 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.55■□□□□ 0.08
VTNP04004 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.55■□□□□ 0.08
VTNP04004 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
VTNP04004 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.55■□□□□ 0.08
VTNP04004 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VTNP04004 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.55■□□□□ 0.08
VTNP04004 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
VTNP04004 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VTNP04004 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
VTNP04004 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VTNP04004 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VTNP04004 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
VTNP04004 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 AC025271.4-201ENST00000621477 1726 ntBASIC15.54■□□□□ 0.08
VTNP04004 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VTNP04004 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VTNP04004 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
VTNP04004 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
VTNP04004 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VTNP04004 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.54■□□□□ 0.08
VTNP04004 AC005912.2-201ENST00000619492 2400 ntBASIC15.54■□□□□ 0.08
VTNP04004 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
VTNP04004 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.54■□□□□ 0.08
VTNP04004 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VTNP04004 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VTNP04004 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.54■□□□□ 0.08
VTNP04004 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.54■□□□□ 0.08
VTNP04004 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.54■□□□□ 0.08
VTNP04004 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.54■□□□□ 0.08
VTNP04004 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VTNP04004 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.54■□□□□ 0.08
VTNP04004 GOLGA2P8-201ENST00000505201 779 ntBASIC15.54■□□□□ 0.08
VTNP04004 RNA5SP406-201ENST00000516106 112 ntBASIC15.54■□□□□ 0.08
VTNP04004 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
VTNP04004 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.54■□□□□ 0.08
VTNP04004 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.54■□□□□ 0.08
VTNP04004 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.54■□□□□ 0.08
VTNP04004 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.54■□□□□ 0.08
VTNP04004 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms