Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 SORD2P-201ENST00000558556 1069 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 MIR4722-201ENST00000578292 60 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 MIR3188-201ENST00000583494 85 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 SPCS2P2-201ENST00000603270 608 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 AC069218.1-201ENST00000435269 762 ntBASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 PGAM1P5-201ENST00000548011 764 ntBASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 RN7SL832P-201ENST00000607781 1756 ntBASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA2E9PIF3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms