Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.27□□□□□ -0.44
TMEM235A6NFC5 AL359845.1-201ENST00000458202 1648 ntBASIC12.27□□□□□ -0.44
TMEM235A6NFC5 AP000437.1-201ENST00000624057 2085 ntBASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AL355102.3-201ENST00000554299 1678 ntBASIC12.27□□□□□ -0.45
TMEM235A6NFC5 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 ACKR1-201ENST00000368121 1240 ntBASIC12.27□□□□□ -0.45
TMEM235A6NFC5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AK2P2-201ENST00000439142 405 ntBASIC12.27□□□□□ -0.45
TMEM235A6NFC5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AL512638.1-201ENST00000457493 794 ntBASIC12.27□□□□□ -0.45
TMEM235A6NFC5 FTLP10-202ENST00000505798 471 ntBASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 FP325330.2-201ENST00000624219 5630 ntBASIC12.27□□□□□ -0.45
TMEM235A6NFC5 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM235A6NFC5 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 RN7SKP175-201ENST00000408472 289 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 MRPS18AP1-201ENST00000414458 589 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AC022137.2-201ENST00000503482 481 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AC068587.3-201ENST00000526613 355 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AC123567.1-201ENST00000548294 1261 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AP001063.1-201ENST00000568332 529 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 CLUHP6-201ENST00000580789 941 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AC079781.4-201ENST00000641908 219 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AP000593.2-201ENST00000542775 1433 ntBASIC12.26□□□□□ -0.45
TMEM235A6NFC5 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM235A6NFC5 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms