Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 KLF2P2-201ENST00000416807 1039 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 AC136604.1-202ENST00000425471 771 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 AC134915.1-201ENST00000426461 574 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 AK2P2-201ENST00000439142 405 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 AC005586.2-201ENST00000563946 837 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 BAP1-211ENST00000615113 489 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 AP001002.3-201ENST00000623482 206 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 MARK2P9-201ENST00000430958 1727 ntBASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AL022313.4-201ENST00000562756 2046 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 RNU1-114P-201ENST00000365297 166 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 MIR574-201ENST00000385209 96 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 KRT18P13-201ENST00000400056 1290 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms