Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 GH1-203ENST00000351388 685 ntTSL 2 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 GOLGA2P8-201ENST00000505201 779 ntBASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 AC132825.4-202ENST00000578792 434 ntBASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 AC005865.2-202ENST00000635814 725 ntBASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 AC007191.1-201ENST00000623179 2995 ntBASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZC3H4Q9UPT8 AC104581.4-201ENST00000623126 3052 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 AC005089.1-201ENST00000619486 2241 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 ASS1P1-201ENST00000402854 1237 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 RN7SKP212-201ENST00000410851 328 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 TREX1-203ENST00000456089 629 ntTSL 3 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 SLC25A15P1-201ENST00000456738 342 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 RNU1-80P-201ENST00000459500 161 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 SNRPD2P2-201ENST00000473818 333 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 AC132812.1-201ENST00000583145 892 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 BX322562.1-201ENST00000617004 561 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 AC092115.1-201ENST00000566277 1402 ntBASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZC3H4Q9UPT8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 CFL1P6-201ENST00000400899 494 ntBASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 RPL10-203ENST00000406022 748 ntTSL 3 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 RPL18AP16-201ENST00000424057 531 ntBASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms