Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 LINC00313-206ENST00000441283 448 ntTSL 3 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 MIR2110-201ENST00000459421 75 ntBASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 ANXA3-209ENST00000512884 1335 ntTSL 5 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 AP005117.1-202ENST00000581724 1908 ntBASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.43■■□□□ 1.02
RIMBP3Q9UFD9 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AD000864.1-201ENST00000624076 2295 ntBASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AL133517.1-201ENST00000413412 748 ntBASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AC007312.1-201ENST00000427493 258 ntBASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 RN7SL105P-201ENST00000475661 299 ntBASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AC104117.1-201ENST00000517817 900 ntBASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIMBP3Q9UFD9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 TIPRL-201ENST00000367830 727 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 PFN1P3-201ENST00000443612 402 ntBASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 PFN1P4-201ENST00000450970 402 ntBASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 CHIA-207ENST00000451398 1256 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 AFMID-205ENST00000586731 550 ntTSL 3 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIMBP3Q9UFD9 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AC007279.1-201ENST00000448547 837 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 OR7E14P-201ENST00000526721 1000 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AC136475.6-201ENST00000533113 289 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AP003717.2-201ENST00000534962 898 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 HIST1H2APS4-202ENST00000635537 681 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 ZSCAN5DP-201ENST00000600684 1488 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 ZDHHC8P1-202ENST00000418264 1403 ntBASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC21.4■■□□□ 1.02
RIMBP3Q9UFD9 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms