Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 AGAP10P-201ENST00000454844 2418 ntBASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
POLR2J2Q9GZM3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 RN7SL837P-201ENST00000463010 287 ntBASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 USP32P1-208ENST00000506594 1164 ntBASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 MIR4683-201ENST00000579659 81 ntBASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 AC073413.1-201ENST00000603927 732 ntBASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 AL358472.3-201ENST00000608147 415 ntBASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 AC072061.1-201ENST00000569710 2234 ntBASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.29□□□□□ -0.28
POLR2J2Q9GZM3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR2J2Q9GZM3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms