Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MSNP1-201ENST00000511640 1732 ntBASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 CHMP1AP1-201ENST00000445563 662 ntBASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AL590640.2-201ENST00000457038 527 ntBASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AC010970.1-201ENST00000445125 1848 ntBASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PHACTR1Q9C0D0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 CCT8L1P-201ENST00000465400 1674 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 DLX4-206ENST00000611342 1662 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 AL118506.1-201ENST00000601296 3082 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 CES1P1-201ENST00000421606 1704 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 CNN2P8-201ENST00000421872 913 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 C2orf69P2-201ENST00000562032 1123 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 AC131902.2-201ENST00000566892 2172 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 AL590824.1-201ENST00000403828 1349 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 Z98257.2-202ENST00000641138 1548 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 AC108024.1-201ENST00000626286 1721 ntBASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PHACTR1Q9C0D0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
PHACTR1Q9C0D0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms