Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 PTPRVP-205ENST00000641549 5067 ntBASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 UBTFL8-201ENST00000426903 2112 ntBASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AC073862.5-201ENST00000624129 2027 ntBASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AC004832.2-201ENST00000426397 482 ntBASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 GCOM2-201ENST00000509133 1104 ntBASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AC107373.2-201ENST00000607735 490 ntBASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 FAM197Y3-203ENST00000618346 717 ntBASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AL691432.3-201ENST00000621860 400 ntBASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AP001002.3-201ENST00000623482 206 ntBASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 CETN4P-206ENST00000642099 2168 ntBASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SEC22CQ9BRL7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 PDIA3P1-201ENST00000471856 1510 ntBASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms