Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 AC079112.1-201ENST00000454972 939 ntBASIC16.62■□□□□ 0.25
SLF1Q9BQI6 RN7SL8P-201ENST00000461771 266 ntBASIC16.62■□□□□ 0.25
SLF1Q9BQI6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 MRPL22P1-201ENST00000505398 616 ntBASIC16.62■□□□□ 0.25
SLF1Q9BQI6 ALG1L13P-202ENST00000519320 584 ntBASIC16.62■□□□□ 0.25
SLF1Q9BQI6 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 DNM1P30-201ENST00000563586 452 ntBASIC16.62■□□□□ 0.25
SLF1Q9BQI6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 RPL17P45-201ENST00000586289 509 ntBASIC16.62■□□□□ 0.25
SLF1Q9BQI6 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 AC087392.5-201ENST00000612517 489 ntBASIC16.62■□□□□ 0.25
SLF1Q9BQI6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 AC064801.2-201ENST00000625052 1303 ntBASIC16.62■□□□□ 0.25
SLF1Q9BQI6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.62■□□□□ 0.25
SLF1Q9BQI6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 ORAOV1P1-201ENST00000503108 395 ntBASIC16.61■□□□□ 0.25
SLF1Q9BQI6 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 MIR6074-201ENST00000612054 107 ntBASIC16.61■□□□□ 0.25
SLF1Q9BQI6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.61■□□□□ 0.25
SLF1Q9BQI6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.61■□□□□ 0.25
SLF1Q9BQI6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.6■□□□□ 0.25
SLF1Q9BQI6 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms