Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 AL662890.1-201ENST00000396818 632 ntBASIC20.57■□□□□ 0.88
SIN3AQ96ST3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 RPL8P2-201ENST00000430538 502 ntBASIC20.57■□□□□ 0.88
SIN3AQ96ST3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 RN7SL258P-201ENST00000478664 300 ntBASIC20.57■□□□□ 0.88
SIN3AQ96ST3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 TBC1D3J-201ENST00000620719 1426 ntBASIC20.57■□□□□ 0.88
SIN3AQ96ST3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC20.57■□□□□ 0.88
SIN3AQ96ST3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 AC091046.1-201ENST00000331871 207 ntBASIC20.56■□□□□ 0.88
SIN3AQ96ST3 MIR557-201ENST00000385239 98 ntBASIC20.56■□□□□ 0.88
SIN3AQ96ST3 MIR645-201ENST00000385283 94 ntBASIC20.56■□□□□ 0.88
SIN3AQ96ST3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 AC008723.1-201ENST00000506922 207 ntBASIC20.56■□□□□ 0.88
SIN3AQ96ST3 AC134698.3-201ENST00000523880 214 ntBASIC20.56■□□□□ 0.88
SIN3AQ96ST3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 SIGLEC18P-201ENST00000602271 909 ntBASIC20.56■□□□□ 0.88
SIN3AQ96ST3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC20.56■□□□□ 0.88
SIN3AQ96ST3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 CHCHD2P2-201ENST00000503744 321 ntBASIC20.55■□□□□ 0.88
SIN3AQ96ST3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 NDUFB10P1-201ENST00000567319 521 ntBASIC20.55■□□□□ 0.88
SIN3AQ96ST3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 KRT8P43-201ENST00000406052 1458 ntBASIC20.55■□□□□ 0.88
SIN3AQ96ST3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC20.55■□□□□ 0.88
SIN3AQ96ST3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.54■□□□□ 0.88
SIN3AQ96ST3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms