Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNX18Q96RF0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SNX18Q96RF0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 BOLA2P3-201ENST00000404566 256 ntBASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC027237.1-201ENST00000560942 655 ntBASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC106820.3-201ENST00000561653 397 ntBASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 AC233724.13-201ENST00000598383 410 ntBASIC13.13□□□□□ -0.31
SNX18Q96RF0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 RPSAP52-203ENST00000622976 1023 ntBASIC13.13□□□□□ -0.31
SNX18Q96RF0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNX18Q96RF0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 TPM3P8-201ENST00000330554 643 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 USP32P1-208ENST00000506594 1164 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 AL391280.1-201ENST00000506969 1062 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 AC104989.1-201ENST00000519711 778 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 SLC25A47P1-201ENST00000531577 414 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 SNX29P1-201ENST00000548357 1007 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 AP005482.1-201ENST00000563722 1273 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms