Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 AL138725.1-201ENST00000407347 1314 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AC092933.1-201ENST00000393644 945 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 MESTP3-201ENST00000503460 968 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 FTLP10-202ENST00000505798 471 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AC005225.4-201ENST00000557330 545 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AC138466.3-201ENST00000619983 221 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 AL445209.1-201ENST00000607269 3491 ntBASIC12.12□□□□□ -0.47
RTN4IP1Q8WWV3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 KRT43P-201ENST00000434019 910 ntBASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 AC016694.1-201ENST00000434179 700 ntBASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 CR383656.12-201ENST00000549567 513 ntBASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 AC138696.2-201ENST00000607376 223 ntBASIC12.11□□□□□ -0.47
RTN4IP1Q8WWV3 AC012645.4-201ENST00000610691 1061 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms