Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCER1Q8TC90 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCER1Q8TC90 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCER1Q8TC90 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 USP39-207ENST00000450066 2086 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 PPY2P-201ENST00000582808 702 ntBASIC21.4■■□□□ 1.02
CCER1Q8TC90 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 AC015936.2-201ENST00000593177 259 ntBASIC21.4■■□□□ 1.02
CCER1Q8TC90 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCER1Q8TC90 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
CCER1Q8TC90 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCER1Q8TC90 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
CCER1Q8TC90 E2F3P2-201ENST00000447755 1422 ntBASIC21.39■■□□□ 1.02
CCER1Q8TC90 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 AL008718.2-201ENST00000609206 1313 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 MARK2P9-201ENST00000430958 1727 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 CHMP1AP1-201ENST00000445563 662 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 INE1-201ENST00000456273 945 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 AC007551.1-201ENST00000457394 519 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 KRT90P-201ENST00000549264 1064 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 AC132938.2-201ENST00000579188 680 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 AL591163.1-201ENST00000641757 987 ntBASIC21.39■■□□□ 1.01
CCER1Q8TC90 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC21.39■■□□□ 1.01
CCER1Q8TC90 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCER1Q8TC90 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC21.38■■□□□ 1.01
CCER1Q8TC90 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCER1Q8TC90 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCER1Q8TC90 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCER1Q8TC90 STX3-207ENST00000633708 3111 ntTSL 5 BASIC21.38■■□□□ 1.01
CCER1Q8TC90 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCER1Q8TC90 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCER1Q8TC90 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
CCER1Q8TC90 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCER1Q8TC90 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCER1Q8TC90 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms